| DeepDTA: deep drug–target binding affinity prediction H Öztürk, A Özgür, E Ozkirimli Bioinformatics 34 (17), i821-i829, 2018 | 1278 | 2018 |
| Identifying gene-disease associations using centrality on a literature mined gene-interaction network A Özgür, T Vu, G Erkan, DR Radev Bioinformatics 24 (13), i277-i285, 2008 | 437 | 2008 |
| WideDTA: prediction of drug-target binding affinity H Öztürk, E Ozkirimli, A Özgür arXiv preprint arXiv:1902.04166, 2019 | 225 | 2019 |
| Text categorization with class-based and corpus-based keyword selection A Özgür, L Özgür, T Güngör Computer and Information Sciences-ISCIS 2005: 20th International Symposium …, 2005 | 222 | 2005 |
| BIOSSES: a semantic sentence similarity estimation system for the biomedical domain G Soğancıoğlu, H Öztürk, A Özgür Bioinformatics 33 (14), i49-i58, 2017 | 198 | 2017 |
| Semi-supervised classification for extracting protein interaction sentences using dependency parsing G Erkan, A Özgür, D Radev Proceedings of the 2007 Joint Conference on Empirical Methods in Natural …, 2007 | 189 | 2007 |
| PHISTO: pathogen–host interaction search tool S Durmuş Tekir, T Çakır, E Ardıç, AS Sayılırbaş, G Konuk, M Konuk, ... Bioinformatics 29 (10), 1357-1358, 2013 | 172 | 2013 |
| Exploring chemical space using natural language processing methodologies for drug discovery H Öztürk, A Özgür, P Schwaller, T Laino, E Ozkirimli Drug Discovery Today 25 (4), 689-705, 2020 | 162 | 2020 |
| A comparative study of SMILES-based compound similarity functions for drug-target interaction prediction H Öztürk, E Ozkirimli, A Özgür BMC bioinformatics 17, 1-11, 2016 | 145 | 2016 |
| Citation summarization through keyphrase extraction V Qazvinian, D Radev, A Özgür Proceedings of the 23rd international conference on computational …, 2010 | 141 | 2010 |
| GLASS: a comprehensive database for experimentally validated GPCR-ligand associations WKB Chan, H Zhang, J Yang, JR Brender, J Hur, A Özgür, Y Zhang Bioinformatics 31 (18), 3035-3042, 2015 | 138 | 2015 |
| A review on computational systems biology of pathogen–host interactions S Durmuş, T Çakır, A Özgür, R Guthke Frontiers in microbiology 6, 235, 2015 | 129 | 2015 |
| Michigan molecular interactions r2: from interacting proteins to pathways VG Tarcea, T Weymouth, A Ade, A Bookvich, J Gao, V Mahavisno, ... Nucleic acids research 37 (suppl_1), D642-D646, 2009 | 118 | 2009 |
| Supervised and unsupervised machine learning techniques for text document categorization A Ozgur Unpublished Master’s Thesis, İstanbul: Boğaziçi University, 2004 | 115 | 2004 |
| Classification of Beta-Lactamases and Penicillin Binding Proteins Using Ligand-Centric Network Models. H Öztürk, E Ozkirimli, A Özgür PloS one 10 (2), e0117874-e0117874, 2015 | 109 | 2015 |
| Introducing meta-services for biomedical information extraction F Leitner, M Krallinger, C Rodriguez-Penagos, J Hakenberg, C Plake, ... Genome biology 9, 1-11, 2008 | 96 | 2008 |
| Improving Named Entity Recognition for Morphologically Rich Languages using Word Embeddings H Demir, A Özgür International Conference on Machine Learning and Applications (ICMLA), 2014 | 95 | 2014 |
| Detecting speculations and their scopes in scientific text A Özgür, D Radev Proceedings of the 2009 conference on empirical methods in natural language …, 2009 | 91 | 2009 |
| Balancing Methods for Multi-label Text Classification with Long-Tailed Class Distribution Y Huang, B Giledereli, A Köksal, A Özgür, E Ozkirimli Proceedings of the 2021 Conference on Empirical Methods in Natural Language …, 2021 | 87 | 2021 |
| Crowdsourced mapping of unexplored target space of kinase inhibitors A Cichońska, B Ravikumar, RJ Allaway, F Wan, S Park, O Isayev, S Li, ... Nature communications 12 (1), 3307, 2021 | 76 | 2021 |
Elif OzkirimliHead of Data Science and Advanced Analytics, Roche確認したメール アドレス: boun.edu.tr
