フォロー
Takahiro G. Yamada
Takahiro G. Yamada
確認したメール アドレス: bio.keio.ac.jp
タイトル
引用先
引用先
SBML Level 3: an extensible format for the exchange and reuse of biological models
SM Keating, D Waltemath, M König, F Zhang, A Dräger, C Chaouiya, ...
Molecular systems biology 16 (8), e9110, 2020
862020
COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms
M Ostaszewski, A Niarakis, A Mazein, I Kuperstein, R Phair, ...
Molecular systems biology 17 (10), e10387, 2021
212021
3D convolutional neural networks-based segmentation to acquire quantitative criteria of the nucleus during mouse embryogenesis
Y Tokuoka, TG Yamada, D Mashiko, Z Ikeda, NF Hiroi, TJ Kobayashi, ...
NPJ systems biology and applications 6 (1), 1-12, 2020
192020
Predicting the future direction of cell movement with convolutional neural networks
S Nishimoto, Y Tokuoka, TG Yamada, NF Hiroi, A Funahashi
PloS one 14 (9), e0221245, 2019
122019
Transcriptome analysis of the anhydrobiotic cell line Pv11 infers the mechanism of desiccation tolerance and recovery
TG Yamada, Y Suetsugu, R Deviatiiarov, O Gusev, R Cornette, ...
Scientific reports 8 (1), 1-11, 2018
92018
Identification of a master transcription factor and a regulatory mechanism for desiccation tolerance in the anhydrobiotic cell line Pv11
TG Yamada, Y Hiki, NF Hiroi, E Shagimardanova, O Gusev, R Cornette, ...
PloS one 15 (3), e0230218, 2020
62020
Activation of cell migration via morphological changes in focal adhesions depends on shear stress in MYCN-amplified neuroblastoma cells
T Hiraiwa, TG Yamada, N Miki, A Funahashi, N Hiroi
Journal of the Royal Society Interface 16 (152), 20180934, 2019
52019
Cas9-mediated genome editing reveals a significant contribution of calcium signaling pathways to anhydrobiosis in Pv11 cells
Y Miyata, H Fuse, S Tokumoto, Y Hiki, R Deviatiiarov, Y Yoshida, ...
Scientific reports 11 (1), 1-14, 2021
42021
Genome-wide role of hsf1 in transcriptional regulation of desiccation tolerance in the anhydrobiotic cell line, pv11
S Tokumoto, Y Miyata, R Deviatiiarov, TG Yamada, Y Hiki, O Kozlova, ...
International journal of molecular sciences 22 (11), 5798, 2021
32021
Direct cell counting using macro-scale smartphone images of cell aggregates
C Imashiro, Y Tokuoka, K Kikuhara, TG Yamada, K Takemura, ...
IEEE Access 8, 170033-170043, 2020
22020
Neural differentiation dynamics controlled by multiple feedback loops in a comprehensive molecular interaction network
T Iwasaki, R Takiguchi, T Hiraiwa, TG Yamada, K Yamazaki, NF Hiroi, ...
Processes 8 (2), 166, 2020
22020
Xitosbml: A modeling tool for creating spatial systems biology markup language models from microscopic images
K Ii, K Mashimo, M Ozeki, TG Yamada, N Hiroi, A Funahashi
Frontiers in genetics, 1027, 2019
22019
Deep learning for non-invasive determination of the differentiation status of human neuronal cells by using phase-contrast photomicrographs
M Ooka, Y Tokuoka, S Nishimoto, NF Hiroi, TG Yamada, A Funahashi
Applied Sciences 9 (24), 5503, 2019
12019
High quality genome assembly of the anhydrobiotic midge provides insights on a single chromosome-based emergence of extreme desiccation tolerance
Y Yoshida, N Shaikhutdinov, O Kozlova, M Itoh, M Tagami, M Murata, ...
NAR genomics and bioinformatics 4 (2), lqac029, 2022
2022
Temperature elevation detection in migrating cells
T Nakamura, J Sakamoto, K Okabe, A Taniguchi, TG Yamada, S Nonaka, ...
Optics Continuum 1 (5), 1085-1097, 2022
2022
Symbolic integration by integrating learning models with different strengths and weaknesses
H Kubota, Y Tokuoka, TG Yamada, A Funahashi
IEEE Access, 2022
2022
SBMLWebApp: Web-Based Simulation, Steady-State Analysis, and Parameter Estimation of Systems Biology Models
TG Yamada, K Ii, M König, M Feierabend, A Dräger, A Funahashi
Processes 9 (10), 1830, 2021
2021
Quantitative analysis of sensitivity to a Wnt3a gradient in determination of the pole‐to‐pole axis of mitotic cells by using a microfluidic device
T Hiraiwa, Y Nakai, TG Yamada, R Tanimoto, H Kimura, Y Matsumoto, ...
FEBS open bio 8 (12), 1920-1935, 2018
2018
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論文 1–18