Jared Bischof
Jared Bischof
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The MG-RAST metagenomics database and portal in 2015
A Wilke, J Bischof, W Gerlach, E Glass, T Harrison, KP Keegan, T Paczian, ...
Nucleic acids research 44 (D1), D590-D594, 2016
Identification of differentially expressed microRNAs in osteosarcoma
RR Lulla, FF Costa, JM Bischof, PM Chou, MF Bonaldo, EF Vanin, ...
Sarcoma 2011, 2011
Identification of microRNAs as potential prognostic markers in ependymoma
FF Costa, JM Bischof, EF Vanin, RR Lulla, M Wang, ST Sredni, V Rajaram, ...
PloS one 6 (10), e25114, 2011
Skyport-container-based execution environment management for multi-cloud scientific workflows
W Gerlach, W Tang, K Keegan, T Harrison, A Wilke, J Bischof, M D'Souza, ...
2014 5th International Workshop on Data-Intensive Computing in the Clouds, 25-32, 2014
Folic acid remodels chromatin on Hes1 and Neurog2 promoters during caudal neural tube development
S Ichi, FF Costa, JM Bischof, H Nakazaki, YW Shen, V Boshnjaku, ...
Journal of Biological Chemistry 285 (47), 36922-36932, 2010
Genome‐wide identification of pseudogenes capable of disease‐causing gene conversion
JM Bischof, AP Chiang, TE Scheetz, EM Stone, TL Casavant, VC Sheffield, ...
Human mutation 27 (6), 545-552, 2006
Epigenetically reprogramming metastatic tumor cells with an embryonic microenvironment
FF Costa, EA Seftor, JM Bischof, DA Kirschmann, L Strizzi, K Arndt, ...
Epigenomics 1 (2), 387-398, 2009
A RESTful API for accessing microbial community data for MG-RAST
A Wilke, J Bischof, T Harrison, T Brettin, M D'Souza, W Gerlach, ...
PLoS computational biology 11 (1), e1004008, 2015
The commonality of plasticity underlying multipotent tumor cells and embryonic stem cells
LM Postovit, FF Costa, JM Bischof, EA Seftor, B Wen, REB Seftor, ...
Journal of cellular biochemistry 101 (4), 908-917, 2007
Global demethylation of rat chondrosarcoma cells after treatment with 5-aza-2′-deoxycytidine results in increased tumorigenicity
CA Hamm, H Xie, FF Costa, EF Vanin, EA Seftor, ST Sredni, J Bischof, ...
PLoS One 4 (12), e8340, 2009
Epigenetic reprogramming as a key contributor to melanocyte malignant transformation
F Molognoni, AT Cruz, FM Meliso, AS Morais, CF Souza, P Xander, ...
Epigenetics 6 (4), 450-464, 2011
Upregulation of mir-221 and mir-222 in atypical teratoid/rhabdoid tumors: potential therapeutic targets
ST Sredni, M de Fátima Bonaldo, FF Costa, CC Huang, CA Hamm, ...
Child's Nervous System 26 (3), 279-283, 2010
Transcriptional profiling of polycythemia vera identifies gene expression patterns both dependent and independent from the action of JAK2V617F
W Berkofsky-Fessler, M Buzzai, MKH Kim, S Fruchtman, V Najfeld, DJ Min, ...
Clinical cancer research 16 (17), 4339-4352, 2010
Microenvironment alters epigenetic and gene expression profiles in Swarm rat chondrosarcoma tumors
CA Hamm, JW Stevens, H Xie, EF Vanin, JA Morcuende, H Abdulkawy, ...
BMC cancer 10 (1), 1-16, 2010
Parallel creation of non-redundant gene indices from partial mRNA transcripts
N Trivedi, J Bischof, S Davis, K Pedretti, TE Scheetz, TA Braun, ...
Future Generation Computer Systems 18 (6), 863-870, 2002
High-throughput gene discovery in the rat
TE Scheetz, JJ Laffin, B Berger, S Holte, SA Baumes, R Brown, S Chang, ...
Genome research 14 (4), 733-741, 2004
Expression of miR-18a and miR-210 in normal breast tissue as candidate biomarkers of breast cancer risk
A Shidfar, FF Costa, D Scholtens, JM Bischof, ME Sullivan, DZ Ivancic, ...
Cancer Prevention Research 10 (1), 89-97, 2017
A metagenomics portal for a democratized sequencing world
A Wilke, EM Glass, D Bartels, J Bischof, D Braithwaite, M D’Souza, ...
Methods in enzymology 531, 487-523, 2013
Multiple mechanisms influence regulation of the cystic fibrosis transmembrane conductance regulator gene promoter
MA Lewandowska, FF Costa, JM Bischof, SH Williams, MB Soares, ...
American journal of respiratory cell and molecular biology 43 (3), 334-341, 2010
A genome-wide analysis of open chromatin in human tracheal epithelial cells reveals novel candidate regulatory elements for lung function
JM Bischof, CJ Ott, SH Leir, N Gosalia, L Song, D London, TS Furey, ...
Thorax 67 (5), 385-391, 2012
論文 1–20