| DIANA-miRPath v3. 0: deciphering microRNA function with experimental support IS Vlachos, K Zagganas, MD Paraskevopoulou, G Georgakilas, ... Nucleic acids research 43 (W1), W460-W466, 2015 | 1645 | 2015 |
| DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions D Karagkouni, MD Paraskevopoulou, S Chatzopoulos, IS Vlachos, ... Nucleic acids research 46 (D1), D239-D245, 2018 | 954 | 2018 |
| DIANA-TarBase v7. 0: indexing more than half a million experimentally supported miRNA: mRNA interactions IS Vlachos, MD Paraskevopoulou, D Karagkouni, G Georgakilas, ... Nucleic acids research 43 (D1), D153-D159, 2015 | 819 | 2015 |
| DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts MD Paraskevopoulou, IS Vlachos, D Karagkouni, G Georgakilas, ... Nucleic acids research 44 (D1), D231-D238, 2016 | 642 | 2016 |
| DIANA-LncBase v3: indexing experimentally supported miRNA targets on non-coding transcripts D Karagkouni, MD Paraskevopoulou, S Tastsoglou, G Skoufos, ... Nucleic acids research 48 (D1), D101-D110, 2020 | 229 | 2020 |
| RNAcentral: a hub of information for non-coding RNA sequences Nucleic Acids Research 47 (D1), D221-D229, 2019 | 221 | 2019 |
| RNAcentral 2021: secondary structure integration, improved sequence search and new member databases Nucleic acids research 49 (D1), D212-D220, 2021 | 169 | 2021 |
| The whole genome sequence of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), reveals insights into the biology and adaptive evolution of a highly … A Papanicolaou, MF Schetelig, P Arensburger, PW Atkinson, JB Benoit, ... Genome biology 17, 1-31, 2016 | 161 | 2016 |
| Characterizing miRNA–lncRNA interplay D Karagkouni, A Karavangeli, MD Paraskevopoulou, AG Hatzigeorgiou Long Non-Coding RNAs: Methods and Protocols, 243-262, 2021 | 43 | 2021 |
| microCLIP super learning framework uncovers functional transcriptome-wide miRNA interactions MD Paraskevopoulou, D Karagkouni, IS Vlachos, S Tastsoglou, ... Nature communications 9 (1), 3601, 2018 | 40 | 2018 |
| DIANA-mirExTra v2. 0: Uncovering microRNAs and transcription factors with crucial roles in NGS expression data IS Vlachos, T Vergoulis, MD Paraskevopoulou, F Lykokanellos, ... Nucleic acids research 44 (W1), W128-W134, 2016 | 39 | 2016 |
| SHP-2 and PD-1-SHP-2 signaling regulate myeloid cell differentiation and antitumor responses A Christofides, XL Katopodi, C Cao, D Karagkouni, K Aliazis, ... Nature Immunology 24 (1), 55-68, 2023 | 27 | 2023 |
| DIANA-miRPath v4. 0: expanding target-based miRNA functional analysis in cell-type and tissue contexts S Tastsoglou, G Skoufos, M Miliotis, D Karagkouni, I Koutsoukos, ... Nucleic Acids Research 51 (W1), W154-W159, 2023 | 16 | 2023 |
| DIANA-microT 2023: including predicted targets of virally encoded miRNAs S Tastsoglou, A Alexiou, D Karagkouni, G Skoufos, E Zacharopoulou, ... Nucleic acids research 51 (W1), W148-W153, 2023 | 14 | 2023 |
| A miR-124-mediated post-transcriptional mechanism controlling the cell fate switch of astrocytes to induced neurons E Papadimitriou, PN Koutsoudaki, I Thanou, D Karagkouni, T Karamitros, ... Stem Cell Reports 18 (4), 915-935, 2023 | 14 | 2023 |
| DIANA-mAP: analyzing miRNA from raw NGS data to quantification A Alexiou, D Zisis, I Kavakiotis, M Miliotis, A Koussounadis, D Karagkouni, ... Genes 12 (1), 46, 2020 | 12 | 2020 |
| TarBase-v9. 0 extends experimentally supported miRNA–gene interactions to cell-types and virally encoded miRNAs G Skoufos, P Kakoulidis, S Tastsoglou, E Zacharopoulou, V Kotsira, ... Nucleic Acids Research 52 (D1), D304-D310, 2024 | 6 | 2024 |
| Transcriptional Profiling of Leishmania infantum Infected Dendritic Cells: Insights into the Role of Immunometabolism in Host-Parasite Interaction M Margaroni, M Agallou, A Vasilakaki, D Karagkouni, G Skoufos, ... Microorganisms 10 (7), 1271, 2022 | 6 | 2022 |
| Randomized phase II trial of dendritic cell/myeloma fusion vaccine with lenalidomide maintenance after upfront autologous hematopoietic cell transplantation for multiple … DJ Chung, N Shah, J Wu, B Logan, L Bisharat, N Callander, G Cheloni, ... Clinical Cancer Research 29 (23), 4784-4796, 2023 | 3 | 2023 |
| A single-nucleus and spatial transcriptomic atlas of the COVID-19 liver reveals topological, functional, and regenerative organ disruption in patients Y Pita-Juarez, D Karagkouni, N Kalavros, JC Melms, S Niezen, ... bioRxiv, 2022 | 3 | 2022 |
Artemis HatzigeorgiouProfessor of Bioinformatics, University of ThessalyVerified email at inf.uth.gr
