Alexander Dobin
Alexander Dobin
確認したメール アドレス: cshl.edu
タイトル引用先
STAR: ultrafast universal RNA-seq aligner
A Dobin, CA Davis, F Schlesinger, J Drenkow, C Zaleski, S Jha, P Batut, ...
Bioinformatics 29 (1), 15-21, 2013
102232013
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57-74, 2012
52732012
Landscape of transcription in human cells
S Djebali, CA Davis, A Merkel, A Dobin, T Lassmann, A Mortazavi, ...
Nature 489 (7414), 101-108, 2012
33232012
The developmental transcriptome of Drosophila melanogaster
BR Graveley, AN Brooks, JW Carlson, MO Duff, JM Landolin, L Yang, ...
Nature 471 (7339), 473-479, 2011
12292011
A user's guide to the encyclopedia of DNA elements (ENCODE)
ENCODE Project Consortium
PLoS biology 9 (4), e1001046, 2011
11172011
A comparative encyclopedia of DNA elements in the mouse genome
F Yue, Y Cheng, A Breschi, J Vierstra, W Wu, T Ryba, R Sandstrom, Z Ma, ...
Nature 515 (7527), 355-364, 2014
10572014
Systematic evaluation of spliced alignment programs for RNA-seq data
PG Engström, T Steijger, B Sipos, GR Grant, A Kahles, T Alioto, J Behr, ...
Nature methods 10 (12), 1185, 2013
4092013
Comparison of the transcriptional landscapes between human and mouse tissues
S Lin, Y Lin, JR Nery, MA Urich, A Breschi, CA Davis, A Dobin, C Zaleski, ...
Proceedings of the National Academy of Sciences 111 (48), 17224-17229, 2014
4062014
Recording on Bit-Patterned Media at Densities of 1 Tb/inand Beyond
HJ Richter, AY Dobin, O Heinonen, KZ Gao, RJM vd Veerdonk, RT Lynch, ...
IEEE Transactions on Magnetics 42 (10), 2255-2260, 2006
3222006
Mapping RNA‐seq Reads with STAR
A Dobin, TR Gingeras
Current protocols in bioinformatics, 11.14. 1-11.14. 19, 2015
2752015
An encyclopedia of mouse DNA elements (Mouse ENCODE)
JA Stamatoyannopoulos, M Snyder, R Hardison, B Ren, T Gingeras, ...
Genome biology 13 (8), 418, 2012
2652012
Domain wall assisted magnetic recording
AY Dobin, HJ Richter
Applied Physics Letters 89 (6), 062512, 2006
2312006
Genome-wide antisense transcription drives mRNA processing in bacteria
I Lasa, A Toledo-Arana, A Dobin, M Villanueva, IR de los Mozos, ...
Proceedings of the National Academy of Sciences 108 (50), 20172-20177, 2011
2242011
Comparative analysis of the transcriptome across distant species
MB Gerstein, J Rozowsky, KK Yan, D Wang, C Cheng, JB Brown, ...
Nature 512 (7515), 445-448, 2014
2222014
The transcriptional diversity of 25 Drosophila cell lines
L Cherbas, A Willingham, D Zhang, L Yang, Y Zou, BD Eads, JW Carlson, ...
Genome research 21 (2), 301-314, 2011
1902011
Recording potential of bit-patterned media
HJ Richter, AY Dobin, RT Lynch, D Weller, RM Brockie, O Heinonen, ...
Applied Physics Letters 88 (22), 222512, 2006
1732006
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
P Batut, A Dobin, C Plessy, P Carninci, TR Gingeras
Genome research 23 (1), 169-180, 2013
1242013
A benchmark for RNA-seq quantification pipelines
M Teng, MI Love, CA Davis, S Djebali, A Dobin, BR Graveley, S Li, ...
Genome biology 17 (1), 74, 2016
1052016
Intrinsic nonlinear ferromagnetic relaxation in thin metallic films
AY Dobin, RH Victora
Physical review letters 90 (16), 167203, 2003
932003
Suppression of chaotic dynamics and localization of two-dimensional electrons by a weak magnetic field
MM Fogler, AY Dobin, VI Perel, BI Shklovskii
Physical Review B 56 (11), 6823, 1997
901997
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