Akifumi S. Tanabe

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Hirokazu TojuProfessor of Kyoto UniversityVerified email at kyoto-u.ac.jp
Hirotoshi SatoGraduate School of Human and Environmental Studies, Kyoto UniversityVerified email at sys.bot.kyoto-u.ac.jp
Satoshi YamamotoNAROVerified email at terra.zool.kyoto-u.ac.jp
Kohmei KadowakiThe Hakubi Center for Advanced Research / Graduate School of Agriculture, Kyoto UniversityVerified email at kyoto-u.ac.jp
Satoshi NagaiFisheries Technology Institute, Coastal and Inland Fisheries Ecosystems Division, Japan FisheriesVerified email at affrc.go.jp
Motoshige YasuikeResearch Center for Aquatic Genomics, National Research Institute of Fisheries ScienceVerified email at affrc.go.jp
Hiroshi S IshiiUniversity of ToyamaVerified email at sci.u-toyama.ac.jp
Takashi HayakawaFaculty of Environmental Earth Science, Hokkaido UniversityVerified email at ees.hokudai.ac.jp
Kiyokazu AgataDirector, National Institute for Basic BiologyVerified email at nibb.ac.jp
Yuji InagakiProfessor of Center of Computational Sciences, University of TsukubaVerified email at ccs.tsukuba.ac.jp
Gregory S GilbertUniversity of California Santa CruzVerified email at ucsc.edu
Wataru MakinoTohoku University, Graduate School of Life SciencesVerified email at m.tohoku.ac.jp
Takema FukatsuNational Institute of Advanced Industrial Science and Technology (AIST), JapanVerified email at aist.go.jp
Teiji SotaProfessor Emeritus, Kyoto UniversityVerified email at st.kyoto-u.ac.jp
Akinori YabukiJapan Agency for Marine-Earth Science and TechnologyVerified email at jamstec.go.jp
Ryoma KamikawaKyoto UniversityVerified email at kyoto-u.ac.jp
Martin KoliskoLaboratory of Genomics and Diversity of Protists, Biology Centre, Czech Acad. Sci.Verified email at paru.cas.cz
Sohta A. IshikawaUniversity of TokyoVerified email at bs.s.u-tokyo.ac.jp
yuki HONGOFisheries Resources Institute, Japan Fisheries Research and Education AgencyVerified email at affrc.go.jp
Hiroki HataEhime UniversityVerified email at sci.ehime-u.ac.jp

Akifumi S. Tanabe

Graduate School of Life Sciences, Tohoku University

Verified email at tohoku.ac.jp - Homepage

Evolutionary Biology Phylogenetics Biodiversity Ecology Bioinformatics


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
High-Coverage ITS Primers for the DNA-Based Identification of Ascomycetes and Basidiomycetes in Environmental Samples H Toju, AS Tanabe, S Yamamoto, H Sato PloS one 7 (7), e40863, 2012	951	2012
Kakusan4 and Aminosan: two programs for comparing nonpartitioned, proportional and separate models for combined molecular phylogenetic analyses of multilocus sequence data AS Tanabe Molecular Ecology Resources 11 (5), 914-921, 2011	732	2011
kakusan: a computer program to automate the selection of a nucleotide substitution model and the configuration of a mixed model on multilocus data AS Tanabe Molecular Ecology Notes 7 (6), 962-964, 2007	356	2007
Two new computational methods for universal DNA barcoding: A benchmark using barcode sequences of bacteria, archaea, animals, fungi, and land plants AS Tanabe, H Toju PLoS ONE 8 (10), e76910, 2013	235	2013
Community composition of root‐associated fungi in a Quercus‐dominated temperate forest: “codominance” of mycorrhizal and root‐endophytic fungi H Toju, S Yamamoto, H Sato, AS Tanabe, GS Gilbert, K Kadowaki Ecology and Evolution 3 (5), 1281-1293, 2013	131	2013
Network hubs in root-associated fungal metacommunities H Toju, AS Tanabe, H Sato Microbiome 6 (1), 1-16, 2018	107	2018
Diversification of endosymbiosis: replacements, co-speciation and promiscuity of bacteriocyte symbionts in weevils H Toju, AS Tanabe, Y Notsu, T Sota, T Fukatsu The ISME journal 7 (7), 1378-1390, 2013	100	2013
Network modules and hubs in plant-root fungal biomes H Toju, S Yamamoto, AS Tanabe, T Hayakawa, HS Ishii Journal of The Royal Society Interface 13 (116), 20151097, 2016	90	2016
How are plant and fungal communities linked to each other in belowground ecosystems? A massively parallel pyrosequencing analysis of the association specificity of root … H Toju, H Sato, S Yamamoto, K Kadowaki, AS Tanabe, S Yazawa, ... Ecology and evolution 3 (9), 3112-3124, 2013	89	2013
Ericaceous plant–fungus network in a harsh alpine–subalpine environment H Toju, AS Tanabe, HS Ishii Molecular Ecology 25 (13), 3242-3257, 2016	86	2016
Diversity and spatial structure of belowground plant–fungal symbiosis in a mixed subtropical forest of ectomycorrhizal and arbuscular mycorrhizal plants H Toju, H Sato, AS Tanabe PLoS One 9 (1), e86566, 2014	82	2014
Comparative study of the validity of three regions of the 18S‐rRNA gene for massively parallel sequencing‐based monitoring of the planktonic eukaryote community AS Tanabe, S Nagai, K Hida, M Yasuike, A Fujiwara, Y Nakamura, ... Molecular ecology resources 16 (2), 402-414, 2016	78	2016
Mycorrhizal fungi mediate the direction and strength of plant–soil feedbacks differently between arbuscular mycorrhizal and ectomycorrhizal communities K Kadowaki, S Yamamoto, H Sato, AS Tanabe, A Hidaka, H Toju Communications Biology 1 (1), 196, 2018	74	2018
Palpitomonas bilix represents a basal cryptist lineage: insight into the character evolution in Cryptista A Yabuki, R Kamikawa, SA Ishikawa, M Kolisko, E Kim, AS Tanabe, ... Scientific reports 4 (1), 4641, 2014	74	2014
Sharing of diverse mycorrhizal and root-endophytic fungi among plant species in an oak-dominated cool–temperate forest H Toju, S Yamamoto, H Sato, AS Tanabe PloS one 8 (10), e78248, 2013	73	2013
Spatial Segregation and Aggregation of Ectomycorrhizal and Root-Endophytic Fungi in the Seedlings of Two Quercus Species S Yamamoto, H Sato, AS Tanabe, A Hidaka, K Kadowaki, H Toju PLoS One 9 (5), e96363, 2014	40	2014
Deep microbial life in high‐quality granitic groundwater from geochemically and geographically distinct underground boreholes K Ino, U Konno, M Kouduka, A Hirota, YS Togo, A Fukuda, D Komatsu, ... Environmental microbiology reports 8 (2), 285-294, 2016	39	2016
Extreme population genetic differentiation and secondary contact in the freshwater copepod Acanthodiaptomus pacificus in the Japanese Archipelago W Makino, AS Tanabe Molecular Ecology 18 (17), 3699-3713, 2009	39	2009
Detection of the horizontal spatial structure of soil fungal communities in a natural forest K Kadowaki, H Sato, S Yamamoto, AS Tanabe, A Hidaka, H Toju Population ecology 56, 301-310, 2014	38	2014
Host shifts enhance diversification of ectomycorrhizal fungi: diversification rate analysis of the ectomycorrhizal fungal genera Strobilomyces and Afroboletus with … H Sato, AS Tanabe, H Toju New Phytologist 214 (1), 443-454, 2017	36	2017

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